| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Arabian Sea | Sea/Bay/Gulf | native | 106009 |
| Bay of Bengal | Sea/Bay/Gulf | native | 349 |
| Central Indian Ocean Islands | sea/bay/gulf | native | 106402 |
| Central Indo-Pacific | sea/bay/gulf | native | 349 |
| Central Polynesia | sea/bay/gulf | native | 106431 |
| Chagos | Sea/Bay/Gulf | native | 3477 |
| Cocos-Keeling/Christmas Island | Sea/Bay/Gulf | native | 349 |
| East African Coral Coast | Sea/Bay/Gulf | native | 106403 |
| East Caroline Islands | Sea/Bay/Gulf | native | 106557 |
| Eastern Coral Triangle | sea/bay/gulf | native | 349 |
| Eastern Indo-Pacific | sea/bay/gulf | native | 106431 |
| Fiji Islands | Sea/Bay/Gulf | native | 349 |
| Gilbert/Ellis Islands | Sea/Bay/Gulf | native | 349 |
| Gulf of Aden | Sea/Bay/Gulf | native | 106009 |
| Gulf of Oman | Sea/Bay/Gulf | native | 130068 |
| Gulf of Thailand | Sea/Bay/Gulf | native | 105537 |
| Hawaii | Sea/Bay/Gulf | native | 106405 |
| Hawaii - province | Sea/Bay/Gulf | native | 106405 |
| Indian Ocean | Sea/Bay/Gulf | native | 349 |
| Indian Ocean | Sea/Bay/Gulf | native | 130068 |
| Indonesian Sea | Sea/Bay/Gulf | native | 83492 |
| Java Transitional | sea/bay/gulf | native | 105915 |
| Lesser Sunda | Sea/Bay/Gulf | native | 349 |
| Line Islands | Sea/Bay/Gulf | native | 349 |
| Mariana Islands | Sea/Bay/Gulf | native | 349 |
| Marshall Islands | Sea/Bay/Gulf | native | 349 |
| Marshall, Gilbert, and Ellis Islands | sea/bay/gulf | native | 349 |
| New Caledonia | Sea/Bay/Gulf | native | 349 |
| Northern and Central Red Sea | Sea/Bay/Gulf | native | 106209 |
| Pacific Ocean | Sea/Bay/Gulf | native | 349 |
| Pacific Ocean | Sea/Bay/Gulf | native | 128987 |
| Papua | Sea/Bay/Gulf | native | 349 |
| Persian Gulf | Sea/Bay/Gulf | native | 349 |
| Phoenix/Tokelau/Northern Cook Islands | Sea/Bay/Gulf | native | 349 |
| Polynesian Waters | Sea/Bay/Gulf | native | 87866 |
| Rapa-Pitcairn | Sea/Bay/Gulf | native | 87866 |
| Red Sea | Sea/Bay/Gulf | native | 349 |
| Red Sea and Gulf of Aden | sea/bay/gulf | native | 349 |
| Samoa Islands | Sea/Bay/Gulf | native | 349 |
| Seychelles | Sea/Bay/Gulf | native | 106407 |
| Society Islands | Sea/Bay/Gulf | native | 87883 |
| Solomon Archipelago | Sea/Bay/Gulf | native | 349 |
| Somali Coastal Current | Sea/Bay/Gulf | native | 97551 |
| Southeast Polynesia | sea/bay/gulf | native | 349 |
| Southern Cook/Austral Islands | Sea/Bay/Gulf | native | 108064 |
| Sunda Shelf | sea/bay/gulf | native | 105537 |
| Temperate Northern Pacific | sea/bay/gulf | native | 349 |
| Tonga Islands | Sea/Bay/Gulf | native | 349 |
| Tropical Northwestern Pacific | sea/bay/gulf | native | 349 |
| Tropical Southwestern Pacific | sea/bay/gulf | native | 106431 |
| Tuamotus | Sea/Bay/Gulf | native | 87883 |
| Tubbataha Reefs | Sea/Bay/Gulf | native | 128987 |
| Vanuatu | Sea/Bay/Gulf | native | 349 |
| West Caroline Islands | Sea/Bay/Gulf | native | 349 |
| Western Coral Triangle | sea/bay/gulf | native | 349 |
| Western Indian Ocean | sea/bay/gulf | native | 106403 |
| Western Indo-Pacific | sea/bay/gulf | native | 106402 |