| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Andaman | sea/bay/gulf | native | 105535 |
| Andaman Sea | Sea/Bay/Gulf | native | 105535 |
| Central Indo-Pacific | sea/bay/gulf | native | 105915 |
| Central Polynesia | sea/bay/gulf | native | 106648 |
| Chagos | Sea/Bay/Gulf | native | 3477 |
| Cocos-Keeling/Christmas Island | Sea/Bay/Gulf | native | 105915 |
| Cold Temperate Northwest Pacific | sea/bay/gulf | native | 75835 |
| East Caroline Islands | Sea/Bay/Gulf | native | 106646 |
| Eastern Coral Triangle | sea/bay/gulf | native | 349 |
| Eastern Indo-Pacific | sea/bay/gulf | native | 106648 |
| Fiji Islands | Sea/Bay/Gulf | native | 349 |
| Gilbert/Ellis Islands | Sea/Bay/Gulf | native | 349 |
| Indian Ocean | Sea/Bay/Gulf | native | 349 |
| Indonesian Sea | Sea/Bay/Gulf | native | 75725 |
| Java Transitional | sea/bay/gulf | native | 105915 |
| Lesser Sunda | Sea/Bay/Gulf | native | 349 |
| Line Islands | Sea/Bay/Gulf | native | 106643 |
| Mariana Islands | Sea/Bay/Gulf | native | 106645 |
| Marshall Islands | Sea/Bay/Gulf | native | 106351 |
| Marshall, Gilbert, and Ellis Islands | sea/bay/gulf | native | 106351 |
| New Caledonia | Sea/Bay/Gulf | native | 349 |
| Northeast Sulawesi | Sea/Bay/Gulf | native | 75725 |
| Pacific Ocean | Sea/Bay/Gulf | native | 349 |
| Papua | Sea/Bay/Gulf | native | 75725 |
| Sahul Shelf | sea/bay/gulf | native | 349 |
| Samar Sea | Sea/Bay/Gulf | native | 821 |
| Samoa Islands | Sea/Bay/Gulf | native | 349 |
| Sea of Japan/East Sea | Sea/Bay/Gulf | native | 75835 |
| Solomon Archipelago | Sea/Bay/Gulf | native | 349 |
| South China Sea | Sea/Bay/Gulf | native | 349 |
| South India and Sri Lanka | Sea/Bay/Gulf | native | 349 |
| Southern China | Sea/Bay/Gulf | native | 106649 |
| Sunda Shelf | sea/bay/gulf | native | 349 |
| Temperate Northern Pacific | sea/bay/gulf | native | 75835 |
| Tonga Islands | Sea/Bay/Gulf | native | 100031 |
| Tropical Northwestern Pacific | sea/bay/gulf | native | 3116 |
| Tropical Southwestern Pacific | sea/bay/gulf | native | 106648 |
| Tubbataha Reefs | Sea/Bay/Gulf | native | 121724 |
| Vanuatu | Sea/Bay/Gulf | native | 349 |
| West and South Indian Shelf | sea/bay/gulf | native | 349 |
| West Caroline Islands | Sea/Bay/Gulf | native | 349 |
| West Philippine Sea | Sea/Bay/Gulf | native | 349 |
| Western Coral Triangle | sea/bay/gulf | native | 75725 |
| Western Indo-Pacific | sea/bay/gulf | native | 349 |